These instructions are for installing a user-space SWISH based
interface to bio_analytics.
- Create the Rserve Docker image.
- Install docker
- Clone https://github.com/JanWielemaker/rserve-sandbox
- Goto the branch BiocManager
- use the 2nd option described in the readme to make
the server available at /home/rserve/socket
- Get SWISH, latest GIT version (provides latest rserve
client).
- Install normally
- Make sure to install the Prolog packages using the
Makefile. You only need the rserve client.
- mkdir config-enabled
cd config-enabled
ln -s ../config-available/rserve.pl
- Install myswish.pl according to the instructions in
the file.
With that, you can run SWISH as an additional IDE in any directory
simply by typing ?- swish. to the Prolog toplevel. It will manage
all its data in a directory `data` (must use a better name).
Install all depending packs.
With that, load your lib stuff into user space, start ?- swish. and
create notebooks and programs.